miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|119417324|gb|DY009451.1|DY009451 GGACCTCGAAACAAAAAATTAGGGTTACAGATTCCTGAATCAGCATCCATGGAAGAGATTACAAAGGGAGTGAACAACAT
GAACTTGGCCGGTGATTCCCAGAAGAAGAACCGGATTCAAGTTTCCAACACCAAGAAACCATTGTTCTTCTACGTCAATC
TCGCCAAGAGGTATATGCAAGAGCACAATGATGTCGAATTGTCTGCCCTTGGGATGGCCATTGCAACCGTTGTTACCATT
GCTGAAATACTCAAGAACAATGGTTTTGCTGTTGAAAAGAAGATCATGACTTCAACTGTTGACATTAAGGATGGCTCAAG
GGGACGTCCTGTGCAGAAACCTAAGCAGATCGAAATTACGCTTGGCAAGTCAGAGAAGTTTGATGAGCTAATGGCTGCAG
CCAATGAAGAAAAGGAAGCAGCAGAAGCTCAGGTGCAGAGCTGAACACAGCTTTCTACTGTTATGGTTTCATGAATCTTT
CTTCTCTCGTGGTGCTTTATATTATTTGTTTAATTTCATTGATTTTTGGCTGAATTTTGAGTTGTTATGTTGGGGTGGTT
TGTTGTACCTGTTGAATCACTTTACATTACTATATGATGATATGAGATTAAAGATGGTCAAAAAAAAAAAAAAAAAAAAA
AAAAAAA




Most similar to sp|O22969|Y2416_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O22969|Y2416_ARATH Uncharacterized protein At2g34160
           OS=Arabidopsis thaliana GN=At2g34160 PE=1 SV=1
          Length = 130

 Score =  199 bits (505), Expect = 2e-50
 Identities = 107/131 (81%), Positives = 112/131 (85%)
 Frame = +1

Query: 49  MEEITKGVNNMNLAGDSQKKNRIQVSNTKKPLFFYVNLAKRYMQEHNDVELSALGMAIAT 228
           MEEIT GVNNMNLA DSQKKNRIQVSNTKKPLFFYVNLAKRYMQ++NDVELSALGMAIAT
Sbjct: 1   MEEITDGVNNMNLATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIAT 60

Query: 229 VVTIAEILKNNGFAVEKKIMTSTVDIKDGSRGRPVQKPKQIEITLGKSEKFDELMXXXXX 408
           VVT+ EILKNNGFAVEKKIMTSTVDIKD +RGRPVQK K IEITL KSEKFDELM     
Sbjct: 61  VVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAK-IEITLVKSEKFDELMAAANE 119

Query: 409 XXXXXXXQVQS 441
                  QVQ+
Sbjct: 120 EKEDAEAQVQN 130